kmer
encoded kmer library for fast operations on kmers up to 31
Summary
| Latest Version | Unknown |
|---|---|
| License | MIT |
| CI Status | Passing |
| Downloads | 0 |
| Last Indexed | 2026-07-21 05:24 |
Tags
Installation
nimble install kmer
choosenim install kmer
git clone https://github.com/brentp/nim-kmer
OS Compatibility
| Platform | Linux | macOS | Windows | FreeBSD | OpenBSD | NetBSD | Android | iOS | WASM | Embedded |
|---|---|---|---|---|---|---|---|---|---|---|
| kmer | ✓ | ✓ | ✓ | - | - | - | - | - | - | - |
Source
| Repository | https://github.com/brentp/nim-kmer |
|---|---|
| Homepage | https://github.com/brentp/nim-kmer |
| Documentation | View Documentation |
| Registry Source | nimble_official |
README
this module allows encoding kmers of length up to 31 into uint64's
it is as fast as possible and allows reverse-complenting on encoded data and adding a single base to the right end or a complemented base for the left end as is needed when sliding along a sequence to generate all kmers.